STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106603051Mycophenolic acid acyl-glucuronide esterase, mitochondrial-like. (286 aa)    
Predicted Functional Partners:
ENSSSAP00000032961
annotation not available
    
   0.636
ubr4
E3 ubiquitin-protein ligase UBR4.
    
   0.636
ENSSSAP00000054995
E3 ubiquitin-protein ligase KCMF1-like.
    
   0.635
ENSSSAP00000060001
annotation not available
    
   0.635
yoy6
ZK652.6.
    
   0.635
LOC106570909
E3 ubiquitin-protein ligase KCMF1-like isoform X2.
    
   0.635
LOC106568344
E3 ubiquitin-protein ligase KCMF1-like isoform X3.
    
   0.635
LOC106563600
Transcription factor IIIA-like isoform X1.
    
 0.571
LOC106590449
Transcription factor IIIA-like.
    
 0.570
ENSSSAP00000016192
Zinc finger DHHC-type containing 22.
   
  
 0.560
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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