STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106595329Chemokine XC receptor 1-like; Belongs to the G-protein coupled receptor 1 family. (430 aa)    
Predicted Functional Partners:
LOC106600142
C-C motif chemokine 20-like.
     
 0.952
LOC106580715
Interleukin-8; Belongs to the intercrine alpha (chemokine CxC) family.
    
 0.949
groa
Growth-regulated alpha protein precursor.
    
 0.937
ENSSSAP00000053417
annotation not available
    
 0.937
CCL19
C-C motif chemokine.
    
 0.926
LOC106570861
C-C motif chemokine.
    
 0.926
LOC106596062
Chemokine XC receptor 1-like; Belongs to the G-protein coupled receptor 1 family.
     
  0.915
LOC106574083
Chemokine XC receptor 1-like; Belongs to the G-protein coupled receptor 1 family.
     
  0.915
LOC106597466
Chemokine XC receptor 1-like; Belongs to the G-protein coupled receptor 1 family.
     
  0.915
LOC106613986
Chemokine XC receptor 1-like; Belongs to the G-protein coupled receptor 1 family.
     
  0.915
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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