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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106595329Chemokine XC receptor 1-like; Belongs to the G-protein coupled receptor 1 family. (430 aa)    
Predicted Functional Partners:
batf3
Basic Leucine zipper transcriptional factor ATF-like 3.
      
 0.571
LOC106571544
Basic leucine zipper transcriptional factor ATF-like 3.
      
 0.571
LOC106575634
G-protein coupled bile acid receptor 1-like.
     
 0.527
ENSSSAP00000106382
annotation not available
     
 0.527
LOC106596630
Metallophosphoesterase 1-like isoform X1.
      
 0.511
ENSSSAP00000062042
Metallophosphoesterase 1.
      
 0.511
mppe1
Metallophosphoesterase 1 isoform X2.
      
 0.511
nsl1
Kinetochore-associated protein NSL1 homolog isoform X1.
      
 0.510
ENSSSAP00000072406
Guanine nucleotide-binding protein subunit alpha-11-like.
    
  0.505
LOC106584405
Guanine nucleotide-binding protein subunit alpha-11-like.
    
  0.505
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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