mtif3 protein (Salmo salar) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

mtif3

Translation initiation factor IF-3, mitochondrial. (288 aa)

Predicted Functional Partners:

mrps6

0.971

rs15

0.966

rps9

0.920

rps9-2

0.920

imp3

0.920

mrps10

0.913

ENSSSAP00000095857

0.913

ENSSSAP00000095860

0.913

rps20

0.913

LOC106595079

0.912

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein sequences:

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSSAP00000095857	LOC106595079	ENSSSAP00000095857	ENSSSAP00000010931	annotation not available	Uncharacterized protein LOC106595079.	0.987
ENSSSAP00000095857	imp3	ENSSSAP00000095857	ENSSSAP00000090425	annotation not available	U3 small nucleolar ribonucleoprotein protein IMP3.	0.944
ENSSSAP00000095857	mrps6	ENSSSAP00000095857	ENSSSAP00000034117	annotation not available	28S ribosomal protein S6, mitochondrial.	0.978
ENSSSAP00000095857	mtif3	ENSSSAP00000095857	ENSSSAP00000001080	annotation not available	Translation initiation factor IF-3, mitochondrial.	0.913
ENSSSAP00000095857	rps9	ENSSSAP00000095857	ENSSSAP00000009591	annotation not available	40S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family.	0.994
ENSSSAP00000095857	rps9-2	ENSSSAP00000095857	ENSSSAP00000018177	annotation not available	Ribosomal protein S9.	0.994
ENSSSAP00000095857	rs15	ENSSSAP00000095857	ENSSSAP00000097016	annotation not available	40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.	0.998
ENSSSAP00000095860	LOC106595079	ENSSSAP00000095860	ENSSSAP00000010931	annotation not available	Uncharacterized protein LOC106595079.	0.987
ENSSSAP00000095860	imp3	ENSSSAP00000095860	ENSSSAP00000090425	annotation not available	U3 small nucleolar ribonucleoprotein protein IMP3.	0.944
ENSSSAP00000095860	mrps6	ENSSSAP00000095860	ENSSSAP00000034117	annotation not available	28S ribosomal protein S6, mitochondrial.	0.978
ENSSSAP00000095860	mtif3	ENSSSAP00000095860	ENSSSAP00000001080	annotation not available	Translation initiation factor IF-3, mitochondrial.	0.913
ENSSSAP00000095860	rps9	ENSSSAP00000095860	ENSSSAP00000009591	annotation not available	40S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family.	0.994
ENSSSAP00000095860	rps9-2	ENSSSAP00000095860	ENSSSAP00000018177	annotation not available	Ribosomal protein S9.	0.994
ENSSSAP00000095860	rs15	ENSSSAP00000095860	ENSSSAP00000097016	annotation not available	40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.	0.998
LOC106595079	ENSSSAP00000095857	ENSSSAP00000010931	ENSSSAP00000095857	Uncharacterized protein LOC106595079.	annotation not available	0.987
LOC106595079	ENSSSAP00000095860	ENSSSAP00000010931	ENSSSAP00000095860	Uncharacterized protein LOC106595079.	annotation not available	0.987
LOC106595079	imp3	ENSSSAP00000010931	ENSSSAP00000090425	Uncharacterized protein LOC106595079.	U3 small nucleolar ribonucleoprotein protein IMP3.	0.967
LOC106595079	mrps10	ENSSSAP00000010931	ENSSSAP00000022119	Uncharacterized protein LOC106595079.	28S ribosomal protein S10, mitochondrial.	0.961
LOC106595079	mrps6	ENSSSAP00000010931	ENSSSAP00000034117	Uncharacterized protein LOC106595079.	28S ribosomal protein S6, mitochondrial.	0.967
LOC106595079	mtif3	ENSSSAP00000010931	ENSSSAP00000001080	Uncharacterized protein LOC106595079.	Translation initiation factor IF-3, mitochondrial.	0.912