Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC106560439Pyruvate carboxylase, mitochondrial-like. (183 aa)    
Predicted Functional Partners:
LOC106605032
Malic enzyme.
   
 0.950
me2
Malic enzyme.
   
 0.950
SSDH
Succinate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 
 0.943
LOC106611774
Malate synthase-like isoform X1.
  
 0.943
pck1
Phosphoenolpyruvate carboxykinase, cytosolic.
   
 
 0.938
LOC106573069
L-lactate dehydrogenase; Belongs to the LDH/MDH superfamily.
  
 0.935
LOC106589258
ATP-citrate synthase; In the C-terminal section; belongs to the succinate/malate CoA ligase alpha subunit family.
   
 
 0.930
LOC100194641
Malate dehydrogenase.
  
 0.928
LOC100196673
Malate dehydrogenase.
  
 0.928
asl
Argininosuccinate lyase.
   
 
 0.926
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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