STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106600553Proteoglycan 4-like. (870 aa)    
Predicted Functional Partners:
LOC106586569
Zona pellucida sperm-binding protein 3-like isoform X2.
   
 
 0.529
ENSSSAP00000024395
annotation not available
   
  0.527
ENSSSAP00000028539
annotation not available
   
  0.527
ENSSSAP00000086728
annotation not available
   
  0.527
ENSSSAP00000092802
annotation not available
   
  0.527
ENSSSAP00000103215
annotation not available
   
  0.527
wdr90
WD repeat-containing protein 90.
   
 0.484
slf1
Ankyrin repeat domain-containing protein 32 isoform X1.
   
 0.459
LOC106604233
Growth/differentiation factor 9-like isoform X1.
   
 0.456
GDF9
Growth/differentiation factor 9-like.
   
 0.456
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.