STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106560462Protein phosphatase 1 regulatory subunit 14B-like. (129 aa)    
Predicted Functional Partners:
tbcb
Tubulin-folding cofactor B.
    
   0.850
tmem86a
Lysoplasmalogenase-like protein TMEM86A isoform X2.
      
 0.699
apip
Methylthioribulose-1-phosphate dehydratase; Catalyzes the dehydration of methylthioribulose-1-phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P). Functions in the methionine salvage pathway. May play a role in apoptosis.
      
 0.664
LOC106608038
Mesogenin-1-like.
      
 0.662
LOC106601579
Serine/threonine-protein phosphatase alpha-2 isoform-like.
    
 0.621
pp1g
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
 0.621
LOC106601579-2
Serine/threonine-protein phosphatase alpha-2 isoform-like.
    
 0.621
ppp1cc
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
 0.621
ppp1cc-2
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
 0.621
vac14
Protein VAC14 homolog.
      
 0.590
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
Server load: low (26%) [HD]