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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSAP00000001142annotation not available (78 aa)    
Predicted Functional Partners:
LOC106610664
Peptide methionine sulfoxide reductase MsrA 1-like.
  
 
 0.668
msra
Peptide methionine sulfoxide reductase.
  
 
 0.668
LOC106571446
Mitochondrial peptide methionine sulfoxide reductase-like.
  
 
 0.668
mrpl20
39S ribosomal protein L20, mitochondrial; Belongs to the bacterial ribosomal protein bL20 family.
   
 
 0.644
LOC106583065
39S ribosomal protein L20, mitochondrial-like.
   
 
 0.644
LOC106582592
Thioredoxin domain-containing protein 3 homolog; Belongs to the NDK family.
  
 0.566
nme8
Thioredoxin domain-containing protein 3 isoform X2; Belongs to the NDK family.
  
 0.566
ENSSSAP00000093050
annotation not available
  
 0.566
LOC106586175
Catalase-like.
   
  
 0.531
LOC106564824
Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide.
   
  
 0.531
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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