Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106603712Methylosome subunit pICln-like. (263 aa)    
Predicted Functional Partners:
mep50
Methylosome protein 50 isoform X1.
   
 0.972
LOC106565677
Methylosome protein 50-like.
   
 0.972
LOC106569427
Protein arginine N-methyltransferase 5; Arginine methyltransferase that can both catalyze the formation of omega-N monomethylarginine (MMA) and symmetrical dimethylarginine (sDMA); Belongs to the class I-like SAM-binding methyltransferase superfamily.
   
 0.971
LOC100380736
Protein arginine N-methyltransferase 5.
   
 0.971
LOC106561682
Small nuclear ribonucleoprotein F-like.
   
 0.938
LOC106576293
Small nuclear ribonucleoprotein F-like.
   
 0.938
LOC106573056
Small nuclear ribonucleoprotein F-like.
   
 0.938
LOC106570608
Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.
   
 0.929
SNRPD1
Small nuclear ribonucleoprotein D1 polypeptide.
   
 0.929
ruxe
Small nuclear ribonucleoprotein E.
   
 0.925
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
Server load: low (14%) [HD]