STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106609906Radial spoke head 10 homolog B-like isoform X1. (914 aa)    
Predicted Functional Partners:
cfap44
Cilia- and flagella-associated protein 44.
   
    0.824
ENSSSAP00000000387
Coiled-coil domain containing 151.
   
  
 0.706
LOC106564573
Coiled-coil domain-containing protein 151-like.
   
  
 0.706
cfap74
Cilia- and flagella-associated protein 74 isoform X2.
    
 
 0.702
ccdc65
Coiled-coil domain-containing protein 65.
   
 
 0.681
rsph14
Radial spoke head 14 homolog isoform X1.
   
 
 0.666
lrrc23
Leucine-rich repeat-containing protein 23.
   
 
 0.662
tsnaxip1
Translin-associated factor X-interacting protein 1.
   
 
 0.649
lrrc34
Leucine-rich repeat-containing protein 34.
    
 
 0.604
LOC106584861
Uncharacterized protein C15orf26 homolog.
      
 0.594
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.