STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106569163Transmembrane protein 174-like. (190 aa)    
Predicted Functional Partners:
LOC106571460
Meprin A subunit.
   
  
 0.683
LOC106571464
Metalloendopeptidase.
   
  
 0.683
lrrc31
Leucine-rich repeat-containing protein 31 isoform X1.
      
 0.596
tm9sf1
Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.
      
 0.578
LOC106572017
SUZ domain-containing protein 1-like.
      
 0.465
LOC106566933
SUZ domain-containing protein 1-like.
      
 0.465
LOC106585180
Zinc finger protein 366-like.
      
 0.420
LOC106580564
Zinc finger protein 366-like isoform X2.
      
 0.420
NSA2
NSA2 ribosome biogenesis factor.
      
 0.408
nsa2
Ribosome biogenesis protein NSA2 homolog.
      
 0.408
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.