Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106563304alpha-1A adrenergic receptor-like. (293 aa)    
Predicted Functional Partners:
LOC106565880
Vomeronasal type-1 receptor.
      
 0.797
LOC106565690
Tachykinin-like peptides receptor 86C.
     
 0.756
LOC106573453
Metabotropic glutamate receptor 3-like.
     
 0.723
LOC106561201
Metabotropic glutamate receptor 3-like.
     
 0.723
LOC106613571
Probable G-protein coupled receptor 52; Belongs to the G-protein coupled receptor 1 family.
      
 0.720
ENSSSAP00000029312
annotation not available
      
 0.713
LOC106583057
Bombesin receptor subtype-3-like.
      
 0.713
LOC106583056
Bombesin receptor subtype-3-like.
      
 0.713
cdipt
CDP-diacylglycerol--inositol 3-phosphatidyltransferase.
      
 0.667
LOC106581479
Extracellular calcium-sensing receptor-like.
     
 0.601
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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