Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-expression
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[Homology]
Score
LOC106590030Heme oxygenase-like. (302 aa)    
Predicted Functional Partners:
fech
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
    
 0.916
fri3
Ferritin; Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation.
    
 0.902
blvra
Biliverdin reductase A.
     
 0.877
BLVRA
Biliverdin reductase A-like.
     
 0.877
cp
Ceruloplasmin; Belongs to the multicopper oxidase family.
     
 0.868
BLVRB
Flavin reductase (NADPH)-like.
    
 0.860
blvrb
Flavin reductase (NADPH).
    
 0.860
LOC106589628
Protoheme IX farnesyltransferase, mitochondrial; Converts protoheme IX and farnesyl diphosphate to heme O. Belongs to the ubiA prenyltransferase family.
     
 0.860
LOC106599140
Cytochrome c heme lyase; Links covalently the heme group to the apoprotein of cytochrome c.
     
  0.847
LOC100194686
Frataxin, mitochondrial.
     
 0.845
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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