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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106607591Wings apart-like protein homolog. (1190 aa)    
Predicted Functional Partners:
LOC106592481
Sister chromatid cohesion protein PDS5 homolog A-like.
   
 0.945
LOC106563851
Sister chromatid cohesion protein PDS5 homolog B-like.
   
 0.944
ENSSSAP00000054905
annotation not available
   
 0.944
LOC106564479
Structural maintenance of chromosomes protein.
   
 0.932
ENSSSAP00000026070
Structural maintenance of chromosomes 3.
   
 0.932
LOC106612584
E3 ubiquitin-protein ligase TRIP12-like isoform X1.
   
    0.911
LOC106580884
E3 ubiquitin-protein ligase TRIP12 isoform X1.
   
    0.911
LOC106563463
sororin-B-like.
    
 0.874
LOC106603131
Sororin-like.
    
 0.872
LOC106563887
Nipped-B protein.
   
 0.870
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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