STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSAP00000001213annotation not available (110 aa)    
Predicted Functional Partners:
mlh1
DNA mismatch repair protein Mlh1.
    
 0.997
msh6
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
  
 0.995
msh2
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
  
 0.995
exo1
Exonuclease 1.
   
 0.990
LOC106584876
Uncharacterized protein LOC106584876.
  
 0.954
ENSSSAP00000011757
annotation not available
  
 0.953
msh4
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
  
 0.953
LOC106605957
mutS protein homolog 5-like.
  
 0.943
LOC106592399
mutS protein homolog 5-like isoform X1.
  
 0.943
LOC106593957
mutS protein homolog 5-like.
  
 0.943
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.