STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106604002Rho-related BTB domain-containing protein 1-like isoform X1. (705 aa)    
Predicted Functional Partners:
LOC106611341
Intersectin-2-like.
    
 0.981
ENSSSAP00000067020
Intersectin 2b.
    
 0.981
LOC100286499
Intersectin-1 isoform X5.
    
 0.951
LOC106574310
Intersectin-1-like isoform X8.
    
 0.951
LOC106583318
Cell surface glycoprotein 1-like isoform X1.
    
 0.951
LOC106590064
Kelch-like ECH-associated protein 1.
    
 0.914
LOC106603113
Kelch-like protein 13 isoform X1.
    
  0.910
klh13
Kelch-like protein 13.
    
  0.910
LOC106586598
Kelch-like protein 9.
    
  0.910
LOC106563441
Kelch-like protein 13 isoform X1.
    
  0.910
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.