STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106601219Inward rectifier potassium channel 4-like isoform X1. (539 aa)    
Predicted Functional Partners:
LOC106574921
Inward rectifier potassium channel 2-like.
     
  0.866
LOC106560953
Potassium voltage-gated channel subfamily KQT member 1-like; Belongs to the potassium channel family.
   
 
 0.803
LOC106593969
Potassium voltage-gated channel subfamily KQT member 1-like; Belongs to the potassium channel family.
   
 
 0.803
LOC106584451
Potassium voltage-gated channel subfamily KQT member 1-like; Belongs to the potassium channel family.
   
 
 0.803
LOC106562471
Potassium voltage-gated channel subfamily KQT member 1-like; Belongs to the potassium channel family.
   
 
 0.803
LOC106564707
Potassium voltage-gated channel subfamily KQT member 5-like isoform X2; Belongs to the potassium channel family.
   
 
 0.585
kcnq3
Potassium voltage-gated channel subfamily KQT member 3 isoform X2; Belongs to the potassium channel family.
   
 
 0.585
LOC106588895
Potassium voltage-gated channel subfamily KQT member 4-like; Belongs to the potassium channel family.
   
 
 0.585
LOC106570506
Potassium voltage-gated channel subfamily KQT member 4-like; Belongs to the potassium channel family.
   
 
 0.585
LOC106572183
Potassium voltage-gated channel subfamily KQT member 2-like isoform X3; Belongs to the potassium channel family.
   
 
 0.585
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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