Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106601158Transcription factor Sox-10-like. (496 aa)    
Predicted Functional Partners:
foxd3
Forkhead box protein D3.
    
 0.823
LOC106584029
Forkhead box protein D3-B-like.
    
 0.823
LOC106565743
Microphthalmia-associated transcription factor-like isoform X1.
    
 0.809
LOC106582858
Microphthalmia-associated transcription factor-like isoform X2.
    
 0.809
ctnnb1
Catenin beta-1.
    
 0.785
tyrp-1
5,6-dihydroxyindole-2-carboxylic acid oxidase isoform X1.
    
 
 0.783
tyrp-1b
5,6-dihydroxyindole-2-carboxylic acid oxidase.
    
 
 0.783
LOC106572214
Paired box protein Pax-7-like isoform X1.
   
 0.729
LOC106599523
Paired box protein Pax-3-like isoform X1.
   
 0.711
LOC106568846
Paired box protein Pax-3-like isoform X2.
   
 0.711
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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