STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106590237Uncharacterized protein LOC106590237 isoform X1. (715 aa)    
Predicted Functional Partners:
LOC106606488
LOW QUALITY PROTEIN: CREB-binding protein-like.
    
 0.728
dis3l2
DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of both mRNAs and miRNAs that have been polyuridylated by a terminal uridylyltransferase. Essential for correct mitosis, and negatively regulates cell proliferation. Belongs to the RNR ribonuclease family. DIS3L2 subfamily.
    
 
 0.718
LOC106584861
Uncharacterized protein C15orf26 homolog.
   
  
 0.718
henmt1
Small RNA 2'-O-methyltransferase.
      
 0.684
LOC106582096
Motile sperm domain-containing protein 2-like.
      
 0.659
mspd2
Motile sperm domain-containing protein 2 isoform X1.
      
 0.659
LOC106564464
CREB-binding protein-like isoform X6.
    
 0.653
LOC106590442
CREB-binding protein-like isoform X1.
    
 0.653
tbp
TATA-box-binding protein isoform X1.
    
 0.642
LOC106602273
TATA box-binding protein-like protein 2.
    
 0.642
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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