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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106604008Uncharacterized protein C10orf107 homolog isoform X3. (262 aa)    
Predicted Functional Partners:
ENSSSAP00000042990
annotation not available
    
 0.767
LOC106593590
Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.
   
    0.560
LOC106611723
Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.
   
    0.560
tm9s2
Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.
   
    0.560
SBSPON
LOW QUALITY PROTEIN: somatomedin-B and thrombospondin type-1 domain-containing protein.
    
 0.559
SBSPON-2
somatomedin-B and thrombospondin type-1 domain-containing protein-like.
    
 0.559
cssa09h4orf47
UPF0602 protein C4orf47 homolog.
    
 
 0.475
LOC106587408
Retinitis pigmentosa 1-like 1 protein isoform X1.
    
 0.469
LOC106566422
Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.
   
    0.469
tm9sf4
Transmembrane 9 superfamily member 2/4.
   
    0.469
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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