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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106565002Signal peptide peptidase-like 3 isoform X2. (448 aa)    
Predicted Functional Partners:
apip
Methylthioribulose-1-phosphate dehydratase; Catalyzes the dehydration of methylthioribulose-1-phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P). Functions in the methionine salvage pathway. May play a role in apoptosis.
      
 0.595
pigy
Phosphatidylinositol N-acetylglucosaminyltransferase subunit Y.
      
 0.550
LOC106593828
Translocation protein SEC63 homolog isoform X2.
   
 
 0.542
slc35a1
CMP-sialic acid transporter isoform X1.
   
  
 0.517
slc35a4-2
Probable UDP-sugar transporter protein SLC35A4 isoform X1.
   
  
 0.517
LOC106607707
CMP-sialic acid transporter-like isoform X2.
   
  
 0.517
LOC106581093
CMP-N-acetylneuraminate-beta-galactosamide- alpha-2,3-sialyltransferase 4-like isoform X1; Belongs to the glycosyltransferase 29 family.
      
 0.511
st3gal4
CMP-N-acetylneuraminate-beta-galactosamide- alpha-2,3-sialyltransferase 4 isoform X1; Belongs to the glycosyltransferase 29 family.
      
 0.511
LOC106612963
CMP-N-acetylneuraminate-beta-galactosamide- alpha-2,3-sialyltransferase 4-like isoform X1; Belongs to the glycosyltransferase 29 family.
      
 0.511
LOC106605373
N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase-like isoform X1.
      
 0.510
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.