Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC106565002Signal peptide peptidase-like 3 isoform X2. (448 aa)    
Predicted Functional Partners:
LOC106593828
Translocation protein SEC63 homolog isoform X2.
   
 
 0.796
LOC106580467
Ran-specific GTPase-activating protein-like.
      
 0.679
apip
Methylthioribulose-1-phosphate dehydratase; Catalyzes the dehydration of methylthioribulose-1-phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P). Functions in the methionine salvage pathway. May play a role in apoptosis.
      
 0.647
LOC106597187
Tetratricopeptide repeat protein 19, mitochondrial-like.
   
  
 0.643
LOC106568661
Tetratricopeptide repeat protein 19, mitochondrial-like.
   
  
 0.643
LOC106581093
CMP-N-acetylneuraminate-beta-galactosamide- alpha-2,3-sialyltransferase 4-like isoform X1; Belongs to the glycosyltransferase 29 family.
      
 0.640
st3gal4
CMP-N-acetylneuraminate-beta-galactosamide- alpha-2,3-sialyltransferase 4 isoform X1; Belongs to the glycosyltransferase 29 family.
      
 0.640
LOC106612963
CMP-N-acetylneuraminate-beta-galactosamide- alpha-2,3-sialyltransferase 4-like isoform X1; Belongs to the glycosyltransferase 29 family.
      
 0.640
LOC106608582
CAAX prenyl protease 2-like.
      
 0.639
LOC106577518
CAAX prenyl protease 2-like.
      
 0.639
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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