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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106601787Parvalbumin beta 1; In muscle, parvalbumin is thought to be involved in relaxation after contraction. It binds two calcium ions (By similarity); Belongs to the parvalbumin family. (109 aa)    
Predicted Functional Partners:
LOC106574738
Peripheral plasma membrane protein CASK-like.
    
 0.726
ENSSSAP00000105696
Calcium/calmodulin-dependent serine protein kinase b.
    
 0.726
cask
Peripheral plasma membrane protein CASK isoform X10; Belongs to the MAGUK family.
    
 0.726
CASK
Peripheral plasma membrane protein CASK-like isoform X11; Belongs to the MAGUK family.
    
 0.726
mlrb
Salmo salar Myosin regulatory light chain 2B, cardiac muscle isoform (mlrb), mRNA.
   
 0.667
wdr90
WD repeat-containing protein 90.
    
 0.665
LOC106565219
Myosin regulatory light chain 2, smooth muscle isoform.
    
 0.656
LOC106583599
Myosin regulatory light polypeptide 9.
    
 0.656
Mlec
Malectin.
   
 0.651
myl6b
Salmo salar Myosin light polypeptide 6B (myl6b), mRNA.
   
 0.647
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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