STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106601709Pyridoxal-dependent decarboxylase domain-containing protein 1-like isoform X2. (597 aa)    
Predicted Functional Partners:
pagr1
PAXIP1-associated glutamate-rich protein 1 isoform X2.
      
 0.581
tatdn2
Putative deoxyribonuclease TATDN2.
      
 0.512
ENSSSAP00000025466
annotation not available
      
 0.511
cg047
CG047 protein isoform X1.
      
 0.506
LOC106606012
Protein phosphatase 1 regulatory subunit 35-like isoform X1.
      
 0.506
cssa13hxorf56
UPF0428 protein CXorf56 homolog.
      
 0.493
wdr27
WD repeat-containing protein 27 isoform X2.
      
 0.493
LOC106594449
Bifunctional apoptosis regulator-like.
      
 0.469
LOC106564108
Bifunctional apoptosis regulator-like.
      
 0.469
ENSSSAP00000013908
annotation not available
      
 0.468
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.