STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sat1Diamine acetyltransferase 1. (172 aa)    
Predicted Functional Partners:
LOC106611136
Ornithine decarboxylase 1-like; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
    
 0.941
odc1
Ornithine decarboxylase 1; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
    
 0.941
srm
Spermidine synthase; Belongs to the spermidine/spermine synthase family.
    
 0.937
agmat
Agmatinase, mitochondrial isoform X1; Belongs to the arginase family.
  
 
 0.930
LOC106581942
Amine oxidase.
     
 0.908
LOC106586788
Amine oxidase.
     
 0.908
LOC106590278
Amine oxidase.
     
 0.903
LOC106597230
Mannose-specific lectin-like.
      
 0.620
paox
Peroxisomal N(1)-acetyl-spermine/spermidine oxidase.
      
 0.577
mif
Macrophage migration inhibitory factor.
   
  
 0.564
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.