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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106593073Partner and localizer of BRCA2-like. (1294 aa)    
Predicted Functional Partners:
brca2
Breast cancer type 2 susceptibility protein isoform X5.
   
 0.999
brca1
Breast cancer type 1 susceptibility protein isoform X2.
   
 0.999
nduc2
NADH dehydrogenase [ubiquinone] 1 subunit C2; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
   
 0.998
ndufs4
NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial.
   
 0.997
aasdh
acyl-CoA synthetase family member 4 isoform X1.
  
 0.997
ENSSSAP00000005671
NADH:ubiquinone oxidoreductase subunit B5.
   
 0.996
LOC106574141
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 5, mitochondrial-like.
   
 0.996
ndufb3
NADH dehydrogenase 1 beta subcomplex subunit 3.
   
 0.995
LOC106573192
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial-like.
   
 0.995
LOC106600555
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-like.
   
 0.994
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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