Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106602321Ras GTPase-activating protein-binding protein 2-like. (564 aa)    
Predicted Functional Partners:
ENSSSAP00000111429
Ubiquitin specific peptidase 10.
   
 
 0.880
LOC106587349
Ubiquitin carboxyl-terminal hydrolase.
   
 
 0.880
LOC100195798
Caprin-1 isoform X4.
   
 
 0.850
LOC106561714
Caprin-1-like isoform X1.
   
 
 0.850
LOC106562317
Caprin-1-like isoform X2.
   
 
 0.850
CAPR1
Caprin-1-like isoform X1.
   
 
 0.850
LOC106585853
Ataxin-2-like isoform X5.
   
 
 0.798
LOC106580186
Ataxin-2-like isoform X12.
   
 
 0.798
atxn2l
Ataxin-2-like protein isoform X1.
   
 
 0.785
LOC106579060
Ataxin-2-like protein isoform X2.
   
 
 0.785
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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