STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mapk8Mitogen-activated protein kinase. (527 aa)    
Predicted Functional Partners:
LOC106604910
Mitogen-activated protein kinase.
   
  0.977
LOC106563760
Mitogen-activated protein kinase.
   
  0.977
LOC106566498
ETS domain-containing protein Elk-1-like isoform X1.
    
 0.968
LOC106572830
Transcription factor AP-1-like.
   
 0.962
LOC106613963
Transcription factor AP-1-like; Belongs to the bZIP family.
   
 0.962
LOC106584280
Transcription factor AP-1-like isoform X1; Belongs to the bZIP family.
   
 0.962
LOC106568560
Transcription factor AP-1-like.
   
 0.962
LOC106564723
Dual specificity mitogen-activated protein kinase kinase 7-like isoform X2.
   
 0.959
LOC106587435
Dual specificity mitogen-activated protein kinase kinase 7-like isoform X1.
   
 0.959
LOC106571028
Proto-oncogene c-Fos-like.
   
 0.954
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.