STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
prdx4Peroxiredoxin-4. (262 aa)    
Predicted Functional Partners:
LOC106563481
Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily.
   
 0.944
LOC106603145
Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily.
   
 0.944
srxn1
Sulfiredoxin-1.
   
 0.923
LOC106579628
Thioredoxin domain-containing protein 5-like; Belongs to the protein disulfide isomerase family.
  
 0.901
LOC106590251
Thioredoxin domain-containing protein 5-like; Belongs to the protein disulfide isomerase family.
  
 0.901
LOC106610576
Thioredoxin; Belongs to the thioredoxin family.
  
 0.899
LOC106608859
Thioredoxin-like.
  
 0.899
LOC106577817
Thioredoxin; Belongs to the thioredoxin family.
  
 0.899
LOC106606037
Endoplasmic reticulum resident protein 44-like.
  
 0.886
LOC106607563
Protein disulfide-isomerase A6-like; Belongs to the protein disulfide isomerase family.
  
 0.886
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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