STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106591889Neuropeptide B-like. (132 aa)    
Predicted Functional Partners:
NPBWR2
Neuropeptides B and W receptor 2.
    
 0.915
LOC106566359
Neuropeptides B/W receptor type 2-like; Belongs to the G-protein coupled receptor 1 family.
    
 0.915
syt3
Synaptotagmin-3.
      
 0.777
LOC106560273
neuromedin-U-like isoform X2.
     
 0.688
nmu
neuromedin-U isoform X1.
     
 0.688
ENSSSAP00000007257
annotation not available
     
 0.632
apln
Apelin.
     
 0.632
agt
Angiotensinogen precursor; Belongs to the serpin family.
     
 0.623
pdyn
Beta-neoendorphin-dynorphin.
     
 0.616
LOC106581827
Protein reprimo A-like.
      
 0.592
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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