STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106600551Serine/threonine-protein kinase OSR1-like isoform X1. (513 aa)    
Predicted Functional Partners:
ENSSSAP00000062648
annotation not available
    
 0.895
LOC106562900
Solute carrier family 12 member 2-like isoform X1.
    
 0.868
ENSSSAP00000019537
Solute carrier family 12 member 1-like.
    
 0.868
LOC106560848
Solute carrier family 12 member 3-like.
    
 0.868
LOC106587038
Solute carrier family 12 member 2-like isoform X1.
    
 0.868
nkcc1a
Na/K/2Cl co-transporter isoform X1.
    
 0.868
LOC106594080
Solute carrier family 12 member 1-like.
    
 0.868
LOC106593828
Translocation protein SEC63 homolog isoform X2.
    
 
 0.841
LOC106598366
Translocation protein SEC62-like isoform X1.
    
 
 0.838
LOC106568713
Translocation protein SEC62-like.
    
 
 0.838
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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