STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106600551Serine/threonine-protein kinase OSR1-like isoform X1. (513 aa)    
Predicted Functional Partners:
LOC106593828
Translocation protein SEC63 homolog isoform X2.
    
 
 0.946
LOC106598366
Translocation protein SEC62-like isoform X1.
    
 
 0.942
LOC106568713
Translocation protein SEC62-like.
    
 
 0.942
LOC106590555
Protein transport protein Sec61 subunit gamma.
   
 
 0.899
sc61g
Protein transport protein Sec61 subunit gamma-like.
   
 
 0.899
sc61g-2
Transport protein Sec61 subunit gamma.
   
 
 0.899
SEC61A1
SEC61 translocon alpha 1 subunit.
    
 
 0.789
LOC106583199
Protein transport protein Sec61 subunit alpha isoform B-like.
    
 
 0.789
s61a1
Salmo salar transport protein Sec61 subunit alpha (s61a1), mRNA.
    
 
 0.789
sc61a
Transport protein Sec61 subunit alpha.
    
 
 0.789
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.