STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106588807Centrosomal protein of 170 kDa-like isoform X2. (1472 aa)    
Predicted Functional Partners:
LOC106575364
Pericentrin-like isoform X3.
  
 
 0.544
LOC106565760
Coiled-coil domain-containing protein 120-like.
    
 0.530
LOC106611955
Mediator of RNA polymerase II transcription subunit 1-like.
    
 0.530
LOC106572952
Coiled-coil domain-containing protein 120-like.
    
 0.530
LOC106582873
Coiled-coil domain-containing protein 120-like.
    
 0.530
ENSSSAP00000029079
annotation not available
    
 
 0.527
LOC106602280
Mitogen-activated protein kinase-binding protein 1-like isoform X1.
    
 
 0.527
LOC106613339
Mitogen-activated protein kinase-binding protein 1-like isoform X1.
    
 
 0.527
LOC106571562
Mitogen-activated protein kinase-binding protein 1-like isoform X3.
    
 
 0.527
ENSSSAP00000092218
Mitogen-activated protein kinase binding protein 1.
    
 
 0.527
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.