STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ap1m2Salmo salar adaptor-related protein complex 1, mu 2 subunit (ap1m2), mRNA. (457 aa)    
Predicted Functional Partners:
LOC106569429
AP-1 complex subunit gamma.
   
 0.972
ap4e1
AP-4 complex subunit epsilon-1 isoform X2.
   
 0.972
LOC100380629
AP-1 complex subunit gamma.
   
 0.972
LOC106584973
AP complex subunit beta.
   
 0.968
LOC106580331
AP complex subunit beta.
   
 0.968
ap4b1
AP-4 complex subunit beta-1.
   
 0.965
LOC106587331
AP-1 complex subunit gamma.
   
 0.964
LOC106587352
AP-1 complex subunit gamma.
   
 0.964
ENSSSAP00000079499
annotation not available
   
 0.906
ap4s1
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
   
 0.906
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.