Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC106608577Neurofilament medium polypeptide-like; Belongs to the intermediate filament family. (1425 aa)    
Predicted Functional Partners:
LOC106576697
Solute carrier family 2, facilitated glucose transporter member 5-like isoform X1; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
    
 
 0.487
ENSSSAP00000087782
BLOC-1 related complex subunit 7.
      
 0.483
LOC106606294
Polycomb group RING finger protein 6-like isoform X3.
    
 
 0.427
pcgf6
Polycomb group RING finger protein 6.
    
 
 0.427
LOC106590004
AT-rich interactive domain-containing protein 4B-like.
    
 0.422
LOC106578775
AT-rich interactive domain-containing protein 4B-like isoform X1.
    
 0.422
arid4a
AT-rich interactive domain-containing protein 4A.
    
 0.422
LOC106611238
AT-rich interactive domain-containing protein 4A-like isoform X4.
    
 0.422
ENSSSAP00000103251
AT-rich interactive domain-containing protein 4B-like.
    
 0.422
LOC106606289
F-box/WD repeat-containing protein 4-like.
      
 0.418
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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