Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ct011C20orf11 homolog. (235 aa)    
Predicted Functional Partners:
LOC106609349
Muskelin-like isoform X1.
    
 0.975
ENSSSAP00000111424
Muskelin-like.
    
 0.975
MAEA
Macrophage erythroblast attacher.
  
 
 0.964
maea
Macrophage erythroblast attacher.
  
 
 0.964
ranbp9
Ran-binding protein 9 isoform X1.
   
 0.960
LOC106560827
Ran-binding protein 10-like.
   
 0.960
LOC106560827-2
Ran-binding protein 10-like isoform X2.
   
 0.960
LOC106612137
Protein RMD5 homolog B-like.
    
 0.957
ENSSSAP00000084422
annotation not available
    
 0.957
LOC106607896
WD repeat-containing protein 26-like isoform X2.
   
 0.953
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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