close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106560531Collagen alpha-1(XXVII) chain B-like. (111 aa)    
Predicted Functional Partners:
tep1
Telomerase protein component 1.
    
 0.570
ppib
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
     
 0.554
p4ha3
Prolyl 4-hydroxylase subunit alpha-3 isoform X1.
    
 0.533
PLOD3
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3.
   
 0.489
ENSSSAP00000040776
Procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2.
   
 0.489
plod1
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 isoform X1.
   
 0.489
LOC106590681
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2-like isoform X2.
   
 0.489
LOC106613072
Serpin H1-like; Belongs to the serpin family.
   
 0.474
LOC106581278
Serpin H1-like; Belongs to the serpin family.
   
 0.474
serph
Serpin H1 isoform X1; Belongs to the serpin family.
   
 0.474
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.