STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106601519DDB1- and CUL4-associated factor 7-like. (342 aa)    
Predicted Functional Partners:
LOC106561926
DNA damage-binding protein 1-like isoform X1.
    
 0.926
ddb1
Salmo salar DNA damage-binding protein 1 (ddb1), mRNA.
    
 0.926
LOC106568202
Autism susceptibility gene 2 protein-like isoform X1.
   
 
 0.887
ENSSSAP00000113058
Ddb1 and cul4 associated factor 11.
    
 0.854
dcaf11
DDB1- and CUL4-associated factor 11; May function as a substrate receptor for CUL4-DDB1 E3 ubiquitin-protein ligase complex; Belongs to the WD repeat LEC14B family.
    
 0.854
LOC106580503
Zinc finger protein 703-like.
    
 
 0.843
LOC106585113
Zinc finger protein 703-like.
    
 
 0.843
LOC106579302
Autism susceptibility gene 2 protein-like isoform X2.
   
 
 0.835
LOC106589276
Autism susceptibility gene 2 protein-like isoform X1.
   
 
 0.835
ENSSSAP00000028840
annotation not available
   
 
 0.785
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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