ENSSSAP00000001554 protein (Salmo salar) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

ENSSSAP00000001554

annotation not available (123 aa)

Predicted Functional Partners:

LOC106589036

0.740

LOC106564577

0.740

mpv17

0.665

ENSSSAP00000099360

0.665

LOC106573904

0.630

LOC106568948

0.630

ENSSSAP00000108127

0.630

LOC106569376

0.625

ENSSSAP00000072258

0.625

peci

0.581

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSSAP00000001554	ENSSSAP00000072258	ENSSSAP00000001554	ENSSSAP00000072258	annotation not available	annotation not available	0.625
ENSSSAP00000001554	ENSSSAP00000099360	ENSSSAP00000001554	ENSSSAP00000099360	annotation not available	Mitochondrial inner membrane protein MPV17.	0.665
ENSSSAP00000001554	ENSSSAP00000108127	ENSSSAP00000001554	ENSSSAP00000108127	annotation not available	MPV17 mitochondrial membrane protein-like 2.	0.630
ENSSSAP00000001554	LOC106564577	ENSSSAP00000001554	ENSSSAP00000017358	annotation not available	Mpv17-like protein isoform X1; Belongs to the peroxisomal membrane protein PXMP2/4 family.	0.740
ENSSSAP00000001554	LOC106568948	ENSSSAP00000001554	ENSSSAP00000097961	annotation not available	Mpv17-like protein 2; Belongs to the peroxisomal membrane protein PXMP2/4 family.	0.630
ENSSSAP00000001554	LOC106569376	ENSSSAP00000001554	ENSSSAP00000011507	annotation not available	Peroxisomal biogenesis factor 19-like.	0.625
ENSSSAP00000001554	LOC106573904	ENSSSAP00000001554	ENSSSAP00000095515	annotation not available	Mpv17-like protein 2; Belongs to the peroxisomal membrane protein PXMP2/4 family.	0.630
ENSSSAP00000001554	LOC106589036	ENSSSAP00000001554	ENSSSAP00000005026	annotation not available	Mpv17-like protein; Belongs to the peroxisomal membrane protein PXMP2/4 family.	0.740
ENSSSAP00000001554	mpv17	ENSSSAP00000001554	ENSSSAP00000098773	annotation not available	Protein Mpv17 isoform X1; Belongs to the peroxisomal membrane protein PXMP2/4 family.	0.665
ENSSSAP00000001554	peci	ENSSSAP00000001554	ENSSSAP00000056967	annotation not available	Peroxisomal 3,2-trans-enoyl-CoA isomerase isoform X1.	0.581
ENSSSAP00000072258	ENSSSAP00000001554	ENSSSAP00000072258	ENSSSAP00000001554	annotation not available	annotation not available	0.625
ENSSSAP00000072258	ENSSSAP00000099360	ENSSSAP00000072258	ENSSSAP00000099360	annotation not available	Mitochondrial inner membrane protein MPV17.	0.625
ENSSSAP00000072258	ENSSSAP00000108127	ENSSSAP00000072258	ENSSSAP00000108127	annotation not available	MPV17 mitochondrial membrane protein-like 2.	0.804
ENSSSAP00000072258	LOC106564577	ENSSSAP00000072258	ENSSSAP00000017358	annotation not available	Mpv17-like protein isoform X1; Belongs to the peroxisomal membrane protein PXMP2/4 family.	0.625
ENSSSAP00000072258	LOC106568948	ENSSSAP00000072258	ENSSSAP00000097961	annotation not available	Mpv17-like protein 2; Belongs to the peroxisomal membrane protein PXMP2/4 family.	0.804
ENSSSAP00000072258	LOC106573904	ENSSSAP00000072258	ENSSSAP00000095515	annotation not available	Mpv17-like protein 2; Belongs to the peroxisomal membrane protein PXMP2/4 family.	0.804
ENSSSAP00000072258	LOC106589036	ENSSSAP00000072258	ENSSSAP00000005026	annotation not available	Mpv17-like protein; Belongs to the peroxisomal membrane protein PXMP2/4 family.	0.625
ENSSSAP00000072258	mpv17	ENSSSAP00000072258	ENSSSAP00000098773	annotation not available	Protein Mpv17 isoform X1; Belongs to the peroxisomal membrane protein PXMP2/4 family.	0.625
ENSSSAP00000072258	peci	ENSSSAP00000072258	ENSSSAP00000056967	annotation not available	Peroxisomal 3,2-trans-enoyl-CoA isomerase isoform X1.	0.526
ENSSSAP00000099360	ENSSSAP00000001554	ENSSSAP00000099360	ENSSSAP00000001554	Mitochondrial inner membrane protein MPV17.	annotation not available	0.665