STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106601521Glial fibrillary acidic protein-like; Belongs to the intermediate filament family. (457 aa)    
Predicted Functional Partners:
bafb
Barrier-to-autointegration factor B isoform X1.
   
 0.580
LOC106563483
Barrier-to-autointegration factor-like.
   
 0.580
LOC106594559
Barrier-to-autointegration factor-like.
   
 0.580
LOC106576720
Barrier-to-autointegration factor-like protein.
   
 0.580
LOC106603147
Barrier-to-autointegration factor.
   
 0.580
LOC106571939
Aquaporin-4-like isoform X2; Belongs to the MIP/aquaporin (TC 1.A.8) family.
   
  
 0.575
LOC106565542
Glutamine synthetase.
      
 0.566
LOC106586884
Oligodendrocyte transcription factor 2-like.
   
  
 0.528
LOC106582489
Oligodendrocyte transcription factor 2-like.
   
  
 0.528
LOC106593504
ELAV-like protein; Belongs to the RRM elav family.
   
  
 0.527
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.