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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
prmt1Protein arginine N-methyltransferase 1 isoform X3; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (359 aa)    
Predicted Functional Partners:
LOC106583922
Protein arginine N-methyltransferase 1-like isoform X3; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.
  
  
 
0.900
LOC106578539
rRNA 2'-O-methyltransferase fibrillarin-like.
   
 
 0.731
fbrl
Salmo salar rRNA 2-O-methyltransferase fibrillarin (fbrl), mRNA.
   
 
 0.731
rs2
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
   
 0.726
RPS2
Ribosomal protein S2.
   
 0.726
ENSSSAP00000016341
annotation not available
   
 0.726
rs2-2
40S ribosomal protein S2.
   
 0.726
bysl
Bystin-like.
   
 0.704
ENSSSAP00000118277
annotation not available
   
 0.704
LOC106607967
Forkhead box protein O3-like.
    
 0.700
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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