STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106604030Serine/threonine-protein kinase DCLK1-like. (699 aa)    
Predicted Functional Partners:
LOC106603110
Neuronal migration protein doublecortin-like isoform X1.
   
 
 0.863
LOC106563431
Neuronal migration protein doublecortin-like.
   
 
 0.863
pot1
Protection of telomeres protein 1 isoform X1.
    
 
 0.736
ENSSSAP00000045229
Melanocortin 1 receptor.
    
 0.679
MC1R
Melanocyte-stimulating hormone receptor; Receptor for MSH (alpha, beta and gamma) and ACTH. The activity of this receptor is mediated by G proteins which activate adenylate cyclase; Belongs to the G-protein coupled receptor 1 family.
    
 0.679
LOC106608867
Phosphatidylinositol 3-kinase catalytic subunit type 3.
    
 0.668
LOC106577844
Phosphatidylinositol 3-kinase catalytic subunit type 3.
    
 0.668
ENSSSAP00000049798
annotation not available
    
   0.600
gas8
Growth arrest-specific protein 8 isoform X1.
    
   0.600
LOC106578834
Pantothenate kinase 3-like isoform X1.
    
   0.600
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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