Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
mxra7Matrix-remodeling-associated protein 7 isoform X2. (270 aa)    
Predicted Functional Partners:
ENSSSAP00000105940
Extra spindle pole bodies like 1, separase.
   
 
 0.730
LOC106560548
Abnormal spindle-like microcephaly-associated protein homolog.
   
  
 0.685
LOC106582108
Mitotic checkpoint serine/threonine-protein kinase BUB1 beta-like.
   
 0.661
ENSSSAP00000047040
annotation not available
   
 0.661
LOC106607702
Mitotic checkpoint serine/threonine-protein kinase BUB1-like.
   
 0.661
LOC106588889
Shugoshin-like 1 isoform X1.
   
 
 0.651
LOC106586378
Uncharacterized protein LOC106586378 isoform X3.
   
 
 0.563
LOC106594936
Nucleolar and spindle-associated protein 1-like isoform X1.
   
  
 0.546
LOC106611473
Nucleolar and spindle-associated protein 1-like isoform X1.
   
  
 0.546
INCEB
Inner centromere protein B.
   
 
 0.496
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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