Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106600542Zinc finger protein 704-like isoform X1. (541 aa)    
Predicted Functional Partners:
suds3
Sin3 histone deacetylase corepressor complex component SDS3 isoform X2.
    
   0.721
suds3-2
Sin3 histone deacetylase corepressor complex component SDS3 isoform X1.
    
   0.721
SAP30L
Histone deacetylase complex subunit SAP30L.
    
   0.630
sp30l
Histone deacetylase complex subunit SAP30L.
    
   0.630
LOC106599142
Histone deacetylase complex subunit SAP130-like isoform X3.
    
   0.622
LOC106560624
Histone deacetylase complex subunit SAP130-like isoform X1.
    
   0.622
LOC106568889
Histone deacetylase complex subunit SAP130-like isoform X3.
    
   0.622
LOC106560445
Breast cancer metastasis-suppressor 1 homolog isoform X2.
    
   0.621
LOC106608459
Breast cancer metastasis-suppressor 1 homolog.
    
   0.621
LOC106611172
Breast cancer metastasis-suppressor 1-like protein-A.
    
   0.602
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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