Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSAP00000001647annotation not available (165 aa)    
Predicted Functional Partners:
LOC106603825
Rap guanine nucleotide exchange factor 6-like isoform X6.
    
 0.846
tnr6
Tumor necrosis factor receptor superfamily member 6 precursor.
    
 
 0.727
LOC106577010
Tumor necrosis factor receptor superfamily member 6-like isoform X1.
    
 
 0.727
LOC106567515
PDZ and LIM domain protein 4-like.
    
 0.656
pdli4
PDZ and LIM domain protein 4.
    
 0.656
GAB1
GRB2-associated-binding protein 1 isoform X3.
    
 0.653
LOC106580294
Pleckstrin homology domain-containing family A member 2-like.
    
  0.643
LOC106585005
Pleckstrin homology domain-containing family A member 2-like isoform X2.
    
  0.643
LOC106611555
Rap guanine nucleotide exchange factor 2-like isoform X5.
    
   0.614
rapgef2
Rap guanine nucleotide exchange factor 2 isoform X8.
    
   0.614
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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