Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
C17orf75Protein Njmu-R1-like isoform X1. (396 aa)    
Predicted Functional Partners:
tm9sf1
Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.
   
 0.963
wdr11
WD repeat-containing protein 11 isoform X1.
    
 
 0.955
vps36
Vacuolar protein-sorting-associated protein 36.
    
 0.953
CHMP3
Charged multivesicular body protein 3.
   
 0.930
LOC106579304
Charged multivesicular body protein 2a-like.
   
 0.930
LOC106570778
Protein FAM91A1-like.
    
 
 0.930
chmp3
Charged multivesicular body protein 3.
   
 0.930
LOC106589123
Protein FAM91A1-like.
    
 
 0.930
ENSSSAP00000077504
annotation not available
    
 
 0.930
LOC106589279
Charged multivesicular body protein 2A.
   
 0.930
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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