STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106601397Probable ATP-dependent RNA helicase DDX5 isoform X1; Belongs to the DEAD box helicase family. (634 aa)    
Predicted Functional Partners:
DDX5
Probable ATP-dependent RNA helicase DDX5; Belongs to the DEAD box helicase family.
  
  
 
0.901
pesc
Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.886
LOC106585655
Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.886
dhx9
ATP-dependent RNA helicase A isoform X1.
   
 0.885
LOC106586372
Splicing factor 3B subunit 1 isoform X1.
   
 0.849
LOC100380860
Splicing factor 3B subunit 1 isoform X1.
   
 0.849
EBNA1BP2
Probable rRNA-processing protein EBP2.
   
 0.837
ebp2
Probable rRNA-processing protein EBP2.
   
 0.837
DKC1
H/ACA ribonucleoprotein complex subunit 4.
  
 
 0.815
LOC100380870
Superkiller viralicidic activity 2-like 2.
   
 0.814
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.