LOC106601397 protein (Salmo salar) - STRING interaction network

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Score

LOC106601397

Probable ATP-dependent RNA helicase DDX5 isoform X1; Belongs to the DEAD box helicase family. (634 aa)

Predicted Functional Partners:

drosha

0.978

dhx9

0.967

LOC106563393

0.933

DKC1

0.933

pesc

0.911

LOC106585655

0.911

LOC106608594

0.875

LOC106577532

0.875

if4a3

0.872

LOC106578539

0.860

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DKC1	LOC106563393	ENSSSAP00000109752	ENSSSAP00000072902	H/ACA ribonucleoprotein complex subunit 4.	H/ACA ribonucleoprotein complex subunit 4-like.	0.543
DKC1	LOC106578539	ENSSSAP00000109752	ENSSSAP00000042724	H/ACA ribonucleoprotein complex subunit 4.	rRNA 2'-O-methyltransferase fibrillarin-like.	0.990
DKC1	LOC106585655	ENSSSAP00000109752	ENSSSAP00000112901	H/ACA ribonucleoprotein complex subunit 4.	Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	0.957
DKC1	LOC106601397	ENSSSAP00000109752	ENSSSAP00000001672	H/ACA ribonucleoprotein complex subunit 4.	Probable ATP-dependent RNA helicase DDX5 isoform X1; Belongs to the DEAD box helicase family.	0.933
DKC1	dhx9	ENSSSAP00000109752	ENSSSAP00000114830	H/ACA ribonucleoprotein complex subunit 4.	ATP-dependent RNA helicase A isoform X1.	0.425
DKC1	drosha	ENSSSAP00000109752	ENSSSAP00000054435	H/ACA ribonucleoprotein complex subunit 4.	Ribonuclease 3 isoform X1.	0.409
DKC1	if4a3	ENSSSAP00000109752	ENSSSAP00000000725	H/ACA ribonucleoprotein complex subunit 4.	Eukaryotic initiation factor 4A-III; ATP-dependent RNA helicase. Involved in pre-mRNA splicing as component of the spliceosome. Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. The EJC is a dynamic structure consisting of core proteins and several peripheral nuclear and cytoplasmic associated factors that join the complex only transiently either during EJC assembly or during subsequent mRNA metabolism. The EJC marks the position of the exon-exon junction in the mature mRNA for the gene expression machinery and the [...]	0.571
DKC1	pesc	ENSSSAP00000109752	ENSSSAP00000076846	H/ACA ribonucleoprotein complex subunit 4.	Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	0.957
LOC106563393	DKC1	ENSSSAP00000072902	ENSSSAP00000109752	H/ACA ribonucleoprotein complex subunit 4-like.	H/ACA ribonucleoprotein complex subunit 4.	0.543
LOC106563393	LOC106578539	ENSSSAP00000072902	ENSSSAP00000042724	H/ACA ribonucleoprotein complex subunit 4-like.	rRNA 2'-O-methyltransferase fibrillarin-like.	0.988
LOC106563393	LOC106585655	ENSSSAP00000072902	ENSSSAP00000112901	H/ACA ribonucleoprotein complex subunit 4-like.	Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	0.957
LOC106563393	LOC106601397	ENSSSAP00000072902	ENSSSAP00000001672	H/ACA ribonucleoprotein complex subunit 4-like.	Probable ATP-dependent RNA helicase DDX5 isoform X1; Belongs to the DEAD box helicase family.	0.933
LOC106563393	dhx9	ENSSSAP00000072902	ENSSSAP00000114830	H/ACA ribonucleoprotein complex subunit 4-like.	ATP-dependent RNA helicase A isoform X1.	0.425
LOC106563393	drosha	ENSSSAP00000072902	ENSSSAP00000054435	H/ACA ribonucleoprotein complex subunit 4-like.	Ribonuclease 3 isoform X1.	0.409
LOC106563393	if4a3	ENSSSAP00000072902	ENSSSAP00000000725	H/ACA ribonucleoprotein complex subunit 4-like.	Eukaryotic initiation factor 4A-III; ATP-dependent RNA helicase. Involved in pre-mRNA splicing as component of the spliceosome. Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. The EJC is a dynamic structure consisting of core proteins and several peripheral nuclear and cytoplasmic associated factors that join the complex only transiently either during EJC assembly or during subsequent mRNA metabolism. The EJC marks the position of the exon-exon junction in the mature mRNA for the gene expression machinery and the [...]	0.571
LOC106563393	pesc	ENSSSAP00000072902	ENSSSAP00000076846	H/ACA ribonucleoprotein complex subunit 4-like.	Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	0.957
LOC106577532	LOC106601397	ENSSSAP00000117047	ENSSSAP00000001672	Splicing factor 1-like.	Probable ATP-dependent RNA helicase DDX5 isoform X1; Belongs to the DEAD box helicase family.	0.875
LOC106577532	dhx9	ENSSSAP00000117047	ENSSSAP00000114830	Splicing factor 1-like.	ATP-dependent RNA helicase A isoform X1.	0.791
LOC106577532	if4a3	ENSSSAP00000117047	ENSSSAP00000000725	Splicing factor 1-like.	Eukaryotic initiation factor 4A-III; ATP-dependent RNA helicase. Involved in pre-mRNA splicing as component of the spliceosome. Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. The EJC is a dynamic structure consisting of core proteins and several peripheral nuclear and cytoplasmic associated factors that join the complex only transiently either during EJC assembly or during subsequent mRNA metabolism. The EJC marks the position of the exon-exon junction in the mature mRNA for the gene expression machinery and the [...]	0.614
LOC106578539	DKC1	ENSSSAP00000042724	ENSSSAP00000109752	rRNA 2'-O-methyltransferase fibrillarin-like.	H/ACA ribonucleoprotein complex subunit 4.	0.990