Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106600540Uncharacterized protein LOC106600540. (823 aa)    
Predicted Functional Partners:
sp1
Transcription factor Sp1 isoform X2.
    
  0.761
myc
Viral myc transforming protein.
    
  0.639
myc2
Transcriptional regulator Myc-2.
    
  0.639
LOC100380641
E3 ubiquitin-protein ligase HUWE1 isoform X13.
    
   0.605
LOC106567026
E3 ubiquitin-protein ligase HUWE1-like isoform X16.
    
   0.605
AKAP7
A-kinase anchor protein 7 isoform gamma-like isoform X1.
      
 0.572
LOC106611541
Collagen alpha-1(XXI) chain-like.
    
 0.566
LOC106589801
Collagen alpha-1(XXI) chain-like isoform X2.
    
 0.566
ABHD1
Abhydrolase domain-containing protein 1-like isoform X1.
   
  
 0.563
LOC106607177
Neuroendocrine convertase 2-like isoform X1; Belongs to the peptidase S8 family.
    
 0.559
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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