Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106601794Sterile alpha motif domain-containing protein 9-like. (1557 aa)    
Predicted Functional Partners:
appl1
DCC-interacting protein 13-alpha isoform X2.
    
 0.820
APPL2
DCC-interacting protein 13-beta-like.
    
 0.820
LOC106560977
DCC-interacting protein 13-beta-like.
    
 0.820
LOC106582615
DCC-interacting protein 13-alpha-like isoform X2.
    
 0.820
LOC106576445
Apoptotic protease-activating factor 1-like isoform X1.
    
 0.798
LOC106609566
Apoptotic protease-activating factor 1-like isoform X1.
    
 0.798
LOC106606575
Baculoviral IAP repeat-containing protein 6-like isoform X14.
    
 0.606
MIB2
E3 ubiquitin-protein ligase MIB2-like isoform X1.
    
  0.510
LOC106566874
E3 ubiquitin-protein ligase MIB2-like.
    
  0.510
LOC106587408
Retinitis pigmentosa 1-like 1 protein isoform X1.
    
 0.470
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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