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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106599708Desmocollin-2-like isoform X1; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion. (903 aa)    
Predicted Functional Partners:
ENSSSAP00000006163
annotation not available
   
 0.809
LOC106600820
Junction plakoglobin-like isoform X1.
   
 0.809
LOC106564751
Junction plakoglobin-like.
   
 0.809
plak
Junction plakoglobin isoform X1.
   
 0.809
ctnnb1
Catenin beta-1.
   
 0.805
pkp2
Plakophilin-2.
   
 0.794
LOC106576400
Plakophilin-2-like.
   
 0.794
LOC106582715
Plakophilin-1-like.
  
 0.789
LOC106566027
Plakophilin-1-like isoform X1.
  
 0.786
LOC106560387
Desmoglein-2-like isoform X2; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion.
  
0.785
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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