STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
spopSpeckle-type POZ protein. (375 aa)    
Predicted Functional Partners:
LOC106600593
Cullin-3-like; Belongs to the cullin family.
   
 0.988
CUL3
Cullin-3-like; Belongs to the cullin family.
   
 0.988
LOC106580681
Cullin-3; Belongs to the cullin family.
   
 0.988
LOC106604342
Suppressor of fused homolog.
     
 0.931
LOC106576854
Suppressor of fused homolog.
     
 0.931
LOC106574262
Zinc finger protein GLI2-like isoform X1.
   
 0.915
LOC106575189
Zinc finger protein GLI2-like.
   
 0.915
gli1
Zinc finger protein GLI1.
   
 0.915
LOC106582360
Zinc finger protein GLI2-like.
   
 0.915
gli3
Transcriptional activator GLI3 isoform X1.
   
 0.915
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.