Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZNF512BZinc finger protein 512B-like isoform X3. (781 aa)    
Predicted Functional Partners:
gtf3c3
General transcription factor 3C polypeptide 3.
    
 0.954
gtf3c1
General transcription factor 3C polypeptide 1.
   
 0.941
LOC106565445
General transcription factor 3C polypeptide 4-like.
    
 0.918
LOC106563234
General transcription factor 3C polypeptide 4-like.
    
 0.918
LOC106563376
General transcription factor 3C polypeptide 5-like.
   
 0.897
ENSSSAP00000073013
General transcription factor IIIC, polypeptide 5.
   
 0.897
gtf3c5
General transcription factor 3C polypeptide 5.
   
 0.897
polr2h
DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.
    
 0.824
bud13
BUD13 homolog.
   
 
 0.659
rexo4
REX4, RNA exonuclease 4 homolog isoform X1.
    
 
 0.637
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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