Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC106609168ADP-ribosylation factor 4-like isoform X1; Belongs to the small GTPase superfamily. Arf family. (181 aa)    
Predicted Functional Partners:
LOC106606442
Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1-like isoform X5.
    
 0.836
LOC106576680
Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1-like isoform X6.
    
 0.836
bbs7
Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.
   
 0.818
LOC106566166
Nck-associated protein 1-like.
   
  0.809
LOC106593908
Cytohesin-4-like.
    
 0.807
bbs2
Bardet-Biedl syndrome 2 protein homolog.
   
 0.793
LOC106565400
ADP-ribosylation factor GTPase-activating protein 1-like isoform X2.
   
 0.788
LOC106583332
ADP-ribosylation factor GTPase-activating protein 1-like isoform X1.
   
 0.788
LOC106599871
ADP-ribosylation factor 1; Belongs to the small GTPase superfamily. Arf family.
     
  0.785
LOC106587500
Coatomer subunit beta-like.
   
 0.774
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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